Nicotiana tabacumAssembly Name:Ntab-TN90
Gene File:GCF_000715135.1_Ntab-TN90_protein.faa.gz
| Position on the Genome | Gene Name | CDS | lcl|NW_015841891.1_cds_XP_016508157.1_21211 |
| PEP | XP_016508157.1 |
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| Position on the Genome | Chromosome | NW_015841891.1 | |
| Start Position | 52954 | ||
| End Position | 62797 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01303742 |
|---|---|---|---|
| KusakiDB version | 2.0 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | DNA mismatch repair protein MutS, core |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | DNA mismatch repair protein MSH2 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF05192,PF05188,PF05190,PF00488 |
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| Pfam Description | Details | ||
| InterPro ID | IPR007696,IPR036678,IPR000432,IPR007860,IPR027417,IPR032642,IPR007861,IPR036187,IPR011184 |
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| InterPro Description | Details | ||
| GO ID | GO:0043570,GO:0006298,GO:0006301,GO:0032301,GO:0006310,GO:0030983,GO:0032302,GO:0032300,GO:0000406,GO:0005634,GO:0005524,GO:0045910,GO:0008094 |
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| GO Description | Details | ||
| GOslim ID | GO:0032300,GO:0051276,GO:0006259,GO:0003676,GO:0006281,GO:0005634,GO:0043167,GO:0016787,GO:0050789,GO:0000166 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Nicotiana tabacum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
